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Gallus gallus
9 Downloadable Samples
Affymetrix Chicken Genome Array (chicken)
Description

Excessive accumulation of lipids in the adipose tissue is a major problem in the present-day broiler industry. However, few studies have analyzed the expression of adipose tissue genes that are involved in pathways and mechanisms leading to adiposity in chickens. Gene expression profiling of chicken ...See More

Publication Title

Profiling of chicken adipose tissue gene expression by genome array.

Alternate Accession IDs
E-GEOD-8010
Sample Metadata Fields

Age

Homo sapiens
7 Downloadable Samples
Illumina HiSeq 2000
Description

Cutaneous CD30+ lymphoproliferative disorder (CD30+LPDs), including lymphomatoid papulosis (LyP) and primary cutaneous anaplastic large-cell lymphoma (PCALCL), comprises the second most common group of cutaneous T cell lymphoma. Previously, we reported that special AT-rich sequence-binding protein1 ...See More

Publication Title

SATB1 Defines a Subtype of Cutaneous CD30<sup>+</sup> Lymphoproliferative Disorders Associated with a T-Helper 17 Cytokine Profile.

Alternate Accession IDs
GSE109620
Sample Metadata Fields

Specimen part, Subject

Homo sapiens
6 Downloadable Samples
Illumina HiSeq 2000
Description

Glioblastoma (GBM) is the most common and aggressive primary brain tumor in adults, with glioma initiating cells (GICs) implicated to be critical for tumor progression and resistance to therapy. KDM1B is involved in regulating GICs'' responses to hypoxia, since over-expression of KDM1B delays the ce ...See More

Publication Title

MiR-215 Is Induced Post-transcriptionally via HIF-Drosha Complex and Mediates Glioma-Initiating Cell Adaptation to Hypoxia by Targeting KDM1B.

Alternate Accession IDs
GSE73573
Sample Metadata Fields

No sample metadata fields

Vitis vinifera
9 Downloadable Samples
Affymetrix Vitis vinifera (Grape) Genome Array (vitisvinifera)
Description

Solar ultraviolet CUV-Cradiation reaching the Earths surface is little due to the filtering effects of the stratospheric ozone layer. At present, artificial UV-C irradiation is utilized for different biological processes. Grape is a major fruit crop around the world. Research has shown that UV-C irr ...See More

Publication Title

Transcriptomic analysis of grape (Vitis vinifera L.) leaves after exposure to ultraviolet C irradiation.

Alternate Accession IDs
E-GEOD-62315
Sample Metadata Fields

Age, Treatment

Sus scrofa
11 Downloadable Samples
Illumina Genome Analyzer II
Description

Although the well-known importance of pig in agriculture, as well as a model for human biology, the miRNA catalog of pig has been largely undefined. Identification and preliminary characterization of adipose- and muscle-specific miRNAs would be a prerequisite for a thorough understanding of their ro ...See More

Publication Title

An atlas of DNA methylomes in porcine adipose and muscle tissues.

Alternate Accession IDs
GSE30334
Sample Metadata Fields

Sex, Age, Specimen part, Subject

Mus musculus
12 Downloadable Samples
Affymetrix Mouse Genome 430 2.0 Array (mouse4302)
Description

Haploid pluripotent stem cells, such as haploid embryonic stem cells (haESCs), facilitate the genetic study of recessive traits. In vitro, fish haESCs maintain haploidy in both undifferentiated and differentiated states, but whether mammalian haESCs can preserve pluripotency in the haploid state has ...See More

Publication Title

Durable pluripotency and haploidy in epiblast stem cells derived from haploid embryonic stem cells in vitro.

Alternate Accession IDs
E-GEOD-62887
Sample Metadata Fields

Specimen part

Zea mays
17 Downloadable Samples
Illumina HiSeq 2000
Description

Our study revealed photoperiod influenced on not only flowering not only stress responses under long-day conditions and ZmCCT and ZmCCA1 were the key functional links between the circadian clock and adversity stress tolerance. Establishment of the molecular link reveals a new interface between the p ...See More

Publication Title

Dual functions of the ZmCCT-associated quantitative trait locus in flowering and stress responses under long-day conditions.

Alternate Accession IDs
None
Sample Metadata Fields

Specimen part

Mus musculus
2 Downloadable Samples
Illumina HiSeq 2000
Description

RNA-seq analysis of Rcor2fl/fl and Rcor2cko embryonic cortex. Overall design: we dissected VZ-SVZ regions of Rcor2fl/fl and Rcor2cko cortex at E13.5 and E15.5 for RNA-seq respectively.

Publication Title

LSD1 co-repressor Rcor2 orchestrates neurogenesis in the developing mouse brain.

Alternate Accession IDs
GSE75038
Sample Metadata Fields

Cell line, Subject

Rattus norvegicus
12 Downloadable Samples
Affymetrix Rat Gene 1.0 ST Array (ragene10st)
Description

This SuperSeries is composed of the SubSeries listed below.

Publication Title

Integrative microRNA-gene expression network analysis in genetic hypercalciuric stone-forming rat kidney.

Alternate Accession IDs
E-GEOD-75543
Sample Metadata Fields

Sex, Specimen part, Disease, Disease stage

Rattus norvegicus
6 Downloadable Samples
Affymetrix Rat Gene 1.0 ST Array (ragene10st)
Description

Urolithiasis is a common desease to human beings, and idiopathic hypercalciuria (IH) is an important risk factor of calcium urolithiasis, previous studies strongly suggested that the decreased tubular Ca2+ reabsorption played a key role of hypercalciuria. However,the molecular mechanism of IH-urolit ...See More

Publication Title

Integrative microRNA-gene expression network analysis in genetic hypercalciuric stone-forming rat kidney.

Alternate Accession IDs
E-GEOD-75542
Sample Metadata Fields

Sex, Specimen part, Disease, Disease stage

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