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Arabidopsis thaliana
22 Downloadable Samples
Arabidopsis Gene 1.0 ST Array (aragene10st)
Description

With frequent fluctuations in global climate, plants often experience co-occurring dry-wet cycles and pathogen infection and this combination adversely affects plant survival. In the past, some studies indicated that morpho-physiological responses of plants to the combined stress are different from ...See More

Publication Title

Global Transcriptional Analysis Reveals Unique and Shared Responses in Arabidopsis thaliana Exposed to Combined Drought and Pathogen Stress.

Alternate Accession IDs
E-GEOD-79681
Sample Metadata Fields

Specimen part

Mus musculus
22 Downloadable Samples
Affymetrix Mouse Genome 430 2.0 Array (mouse4302)
Description

SV40 large T antigen (TAg) contributes to cell transformation, in part, by targeting two well characterized tumor suppressors, pRb and p53. TAg expression affects the transcriptional circuits controlled by Rb and by p53. We have performed a microarray analysis to examine the global change in gene ex ...See More

Publication Title

Induction of interferon-stimulated genes by Simian virus 40 T antigens.

Alternate Accession IDs
E-GEOD-20620
Sample Metadata Fields

No sample metadata fields

Homo sapiens
5 Downloadable Samples
Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)
Description

Expression profiling of isoflavone and 3,3-diindolylmethane treated C4-2B prostate cancer cells was conducted using Affymetrix Human Genome U133 Plus 2.0. Array

Publication Title

Targeting bone remodeling by isoflavone and 3,3'-diindolylmethane in the context of prostate cancer bone metastasis.

Alternate Accession IDs
E-GEOD-35324
Sample Metadata Fields

Cell line, Time

Mus musculus
6 Downloadable Samples
Affymetrix Mouse Genome 430 2.0 Array (mouse4302)
Description

Immune memory cells are poised to rapidly expand and elaborate effector functions upon reinfection. However, despite heightened readiness to respond, memory cells exist in a functionally quiescent state. The paradigm is that memory cells remain inactive due to lack of TCR stimuli. Here we report a ...See More

Publication Title

Quiescence of Memory CD8(+) T Cells Is Mediated by Regulatory T Cells through Inhibitory Receptor CTLA-4.

Alternate Accession IDs
E-GEOD-67593
Sample Metadata Fields

Specimen part

Mus musculus
11 Downloadable Samples
Affymetrix Mouse Genome 430 2.0 Array (mouse4302)
Description

Using killer cell lectin-like receptor G1 as a marker to distinguish terminal effector cells from memory precursors, we found that despite their diverse cell fates both subsets possessed remarkably similar gene expression profiles and functioned as equally potent killer cells. However, only the memo ...See More

Publication Title

Functional and genomic profiling of effector CD8 T cell subsets with distinct memory fates.

Alternate Accession IDs
E-GEOD-10239
Sample Metadata Fields

No sample metadata fields

Mus musculus
11 Downloadable Samples
Affymetrix Mouse Genome 430 2.0 Array (mouse4302)
Description

CD25, the high affinity interleukin-2 (IL-2) receptor alpha-chain, is rapidly upregulated by antigen-specific CD8+ T cells after T cell receptor stimulation. We demonstrated that during an acute viral infection, CD25 expression was dynamic, and a subset of virus-specific CD8+ T cells sustained CD25 ...See More

Publication Title

Prolonged interleukin-2Ralpha expression on virus-specific CD8+ T cells favors terminal-effector differentiation in vivo.

Alternate Accession IDs
E-GEOD-19825
Sample Metadata Fields

Specimen part

Mus musculus
13 Downloadable Samples
Affymetrix Mouse Genome 430 2.0 Array (mouse4302)
Description

Long recognized as an evolutionarily ancient cell type involved in tissue homeostasis and immune defense against pathogens, macrophages are being rediscovered as regulators of several diseases including cancer. Here we show that in mice, mammary tumor growth induces the accumulation of tumor-associ ...See More

Publication Title

The cellular and molecular origin of tumor-associated macrophages.

Alternate Accession IDs
E-GEOD-56755
Sample Metadata Fields

Age, Specimen part

Homo sapiens
5 Downloadable Samples
Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)
Description

We have determined that tenascin C (TNC) regulates the growth of human brain tumor initiating cells (BTICs). We have identified novel mechanisms by which TNC regulates BTIC growth. Analysis of the array data identified a number of genes that were altered with TNC treatment that could potentially reg ...See More

Publication Title

Activation of NOTCH Signaling by Tenascin-C Promotes Growth of Human Brain Tumor-Initiating Cells.

Alternate Accession IDs
E-GEOD-94640
Sample Metadata Fields

Specimen part, Cell line, Treatment

Mus musculus
21 Downloadable Samples
Illumina HiSeq 1500
Description

Macrophages readily change their phenotype in response to exogenous stimuli. In this work, macrophages were stimulated under a variety of experimental conditions, and alterations in mRNA levels were analyzed. We identified three transcriptionally related populations of macrophages with immunoregulat ...See More

Publication Title

The generation of macrophages with anti-inflammatory activity in the absence of STAT6 signaling.

Alternate Accession IDs
None
Sample Metadata Fields

No sample metadata fields

Homo sapiens
12 Downloadable Samples
Affymetrix Human Genome U133A 2.0 Array (hgu133a2)
Description

Human Polynucleotide Phosphorylase (hPNPaseold-35) is an evolutionarily conserved 35 exoribonuclease implicated in the regulation of numerous physiological processes like maintenance of mitochondrial homeostasis, mtRNA import and aging-associated inflammation.

Publication Title

Analysis of global changes in gene expression induced by human polynucleotide phosphorylase (hPNPase(old-35)).

Alternate Accession IDs
E-GEOD-53604
Sample Metadata Fields

Cell line, Treatment

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